PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_11572
Common NameKK1_011914
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TALE
Protein Properties Length: 595aa    MW: 66825.4 Da    PI: 6.317
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_11572genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox18.82.8e-063904291954
                    HHH..SSS--HHHHHHHHHHCTS-HHH..HHHHHHHHHHH CS
       Homeobox  19 Fek..nrypsaeereeLAkklgLterq..VkvWFqNrRak 54 
                    Fe   ++yps  ++  LA+++gL+ +q  V++WF N R +
  C.cajan_11572 390 FEHflHPYPSDVDKHILARQTGLSRSQarVSNWFINARVR 429
                    554459*****************865444*********88 PP

2BELL100.21.6e-32256322272
           BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                    + elqk+k++LlslleeVd+rYk+y++q+++v+ssFeava    a++Y +lAlka+SrhFrcLkd i++qi
  C.cajan_11572 256 FVELQKRKTRLLSLLEEVDRRYKHYCNQMKAVVSSFEAVA----ATVYSALALKAMSRHFRCLKDGIMDQI 322
                    679************************************7....89************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.0E-50200320IPR006563POX domain
PfamPF075261.4E-40204318IPR006563POX domain
PROSITE profilePS5007110.025368433IPR001356Homeobox domain
CDDcd000861.99E-9371433No hitNo description
SMARTSM003893.7E-6371437IPR001356Homeobox domain
SuperFamilySSF466894.71E-14372440IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.8E-25374440IPR009057Homeodomain-like
PfamPF059205.9E-16388429IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MARELCEEKS KDMASSTGFF YSDVSSNNPT HLMNHIQGFV TDPEMFNLTT GMEMIGFSKN  60
LQPHSSESNG AMWKSFFGKP GQHAGPSSSK TMNESSSNYY NHHEYNSNNN NNKQDFTSGI  120
SETSSENLIV GGGHDSSAPW QENRLMVDDS SLRCVFPCEG NERPSQGLSL SLSSTNPSSI  180
GLQSFELRQT SHQQHLSDFG HFLIKNSKFL VPAQELLNEF CSLGTKENDV AKIKNKQWEE  240
GGGGSSKNHS LSSLEFVELQ KRKTRLLSLL EEVDRRYKHY CNQMKAVVSS FEAVAATVYS  300
ALALKAMSRH FRCLKDGIMD QIQATRKAMG EKDPVAPGTT RGETPRLRII DQSLRQQRAF  360
QQISMMETHP WRPQRGLPER SVSVLRAWLF EHFLHPYPSD VDKHILARQT GLSRSQARVS  420
NWFINARVRL WKPMVEEMYM EEEKEQQNDV ALGSSENIPE EDQKASDEKP TQGRLIRIDS  480
ECVSSIVNNQ NDTKSGKSVQ NDERMNNNAE TFGCVELNFS SYTHESSSGG GVSLTLGLQQ  540
HGESGVSLAF PAATQFYARD PIEECQTVQY SLLDGEGQNM PYRNLMGTHL LHDLV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A5e-14377437563Homeobox protein Meis2
4xrm_B5e-14377437563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-145AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014510083.10.0PREDICTED: homeobox protein BEL1 homolog
RefseqXP_014510084.10.0PREDICTED: homeobox protein BEL1 homolog
SwissprotQ388971e-136BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A151TF350.0A0A151TF35_CAJCA; Homeobox protein BEL1 isogeny
STRINGGLYMA08G02020.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46502030
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-114TALE family protein